4.1. Division I-
Aphragmophora
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and Ctenodontina/
Flabellodontina
hypothesis
Studiesontheinternalsystematicsinchaetognaths ( Nielsen, 2001; Papillon et al., 2006; Perez et al., 2014) revealed two major groups,
Phragmophora
and
Aphragmophora
, on the basis of the occurrence of the phragms. Throughout the debate on chaetognath evolutionary trends, authors like Tokioka (1965a) and Casanova (1985) agreed to consider the presence of phragms as a plesiomorphic state but with slightly different hypotheses. Salvini-Plawen (1986) suggested a radically different concept which contradicted the primitiveness of phragms and identified
Pterosagittidae
as the sister group to all remaining families.
Later, Bieri (1991a) pointed out a possible relationship between
P. draco
and species belonging to the family
Sagittidae
. The inclusion of
P. draco
within
Sagittidae
has been corroborated by many reports ( Harzsch et al., 2009; Gasmi et al., 2014). In agreement with these reports, our study also showed an assemblage of
P. draco
PETER et al. / Turk J Zool
(
Pterosagittidae
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) to that of
Sagittidae
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species. Although there is only one species that was taken into account from
Krohnittidae
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, the
K. subtilis
ascended as sister-species to
S. enflata
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by both analyses and showed a close assemblage to that of
Sagittidae
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species. As stated by Gasmi et al. (2014) using both morphological and molecular data, monophyly of
Sagittidae
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were not retrieved in our analyses and revealed that
Sagittidae
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is strictly paraphyletic. Hence, we propose that the
Aphragmophora
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division encompassed
Sagittidae
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comprising
Pterosagittidae
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and
Krohnittidae
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families and our analyses revives the concept of
Aphragmophora
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, a clade invalidated by Papillon et al. (2006). In parallel to our findings, the first molecular study conducted by Telford and Holland (1997) using LSU rRNA gene upheld the concept
Aphragmophora
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by including
Sagittidae
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, Ptreosagittidae, and
Krohnittidae
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under a unique clade. Again, a recent phylogenetic study conducted by Gasmi et al. (2014) using both SSU and LSU rRNA genes were also supported the monophyly of
Aphragmophora
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with the
Pterosagittidae
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included in the
Sagittidae
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. However, our findings undermined an earlier hypothesis proposed by Papillon et al. (2006) using 26 sequences of the SSU rRNA isolated from members of six extant families. According to them, the order
Aphragmophora
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is monophyletic without
Pterosagitta draco
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, the only living representative of pterosgittidae family.
Finally, moving on to Tokioka’s biclassification concept of
Aphragmophora
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into two sub-orders (
Flabellodontina
containing the family
Krohnittidae
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and Ctenodontina containing families
Sagittidae
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and
Pterosagittidae
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), our study established that
Sagittidae
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sensu stricto is a paraphyletic assemblage from which
P. draco
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and
K. subtilis
derives. Morphological studies conducted by many scientists were already disproved this concept and added that further division of
Aphragmophora
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into Ctenodontina/
Flabellodontina
is not relevant (Salvini-Plawen, 1986; Casanova, 1996 and Gasmi et al., 2014). Later, Papillon et al. (2006) and Gasmi et al. (2014) using the molecular phylogeny of a portion of ribosomal (rRNA) genes also disproved this biclassification concept. Hence, the Ctenodontina and
Flabellodontina
concept and the hypothesis based on the structure of the cephalic armature were not supported.
4.2. Division II-
Phragmophora
and validity of Biphragmophora/ Monophragmophora and Syngonata / Chorismogonata hypotheses
According to our results, earlier classification which included
Eukrohnia
, Heterokrohnia, and
Spadella
in a single family viz.,
Eukrohniidae
as proposed by Von Ritter-Zahony (1911) and Hyman (1959) is invalid. In parallel to the statement proposed by Gasmi et al. (2014) who used SSU and LSU rRNA genes, both the Bayesian and ML trees formed by COI gene were able to separate the species of
Eukrohniidae
,
Spadellidae
, and
Heterokrohniidae
in three separate clades. As stated by Telford and Holland (1997) who used the LSU rRNA gene, the grouping of
Eukrohniidae
,
Spadellidae
, and
Heterokrohniidae
under the monophyletic division of
Phragmophora
is found well supported for the available molecular datasets studied and thereby invalidated Gasmi’s concept of paraphyly of
Phragmophora ( Gasmi et al., 2014)
. Again, our results underscored an earlier morphological hypothesis proposed by Tokioka (1965a, 1965b) and Salvini-Plawen (1986) regarding the monophyly of
Phragmophora
and undermined their concept of inclusion of
Heterokrohniidae
under
Eukrohniidae
.
Our study unambiguously confirmed the monophyly of
Eukrohniidae
, since
Eukrohnia bathyantarctica
,
E. fowleri
,
E. hamata
, and
E. macroneura
produced a unique assemblage with support values 1/81.9. This result was in accordance with recent phylogenetic analyses where a close relationship was observed in species under the family
Eukrohniidae
( Jennings et al., 2010, Gasmi et al., 2014). The molecular analyses supported the division of
Phragmophora
into two monophyletic groups, the Monophragmophora and Biphragmophora. Phylogenetic trees showed Casanova’s concept of Monophragmophora (
Eukrohniidae
and
Spadellidae
) as a natural group, yet with low robust values (0.64/54). In agreement with the Casanova’s hypothesis, when placed
Heterokrohniidae
under the sub-division Biphragmophora, the available set of sequences of Heterokrohnia species produced a distinctive clade. Hence, the subdivisional concept of Biphragmophora was found true and rejected the statement proposed by Papillon et al. (2006). However, to definitely conclude such a sister-group relationship between these three families (
Eukrohniidae
,
Spadellidae
and
Heterokrohniidae
), broader COI gene sequences from various species of
Heterokrohniidae
, meso-bathyplanktonic
Eukrohniidae
, and representative of Hemispadella genus, a link between the families
Heterokrohniidae
and
Spadellidae, ( Casanova, 1996)
need to be studied. Moving on to the biclassification concept of Casanova in to Syngonata and Chorismogonata, a clear separation was detected between the species under
Phragmophora
and
Aphragmophora
, and thereby the Syngonata and Chorismogonata hypothesis found undermined. Earlier studies conducted by Papillon et al. (2006) and Gasmi et al. (2014) already rejected the Syngonata and Chorismogonata hypothesis.
Although this study provides some coverage of species of phylum Chaetognatha, it is not a complete analysis of ca. 130 chaetognath species from the global oceans ( Miyamoto et al., 2014). Taxonomic coverage was uneven for
Heterokrohniidae
,
Krohnittidae
, and
Spadellidae
families. Hence, an expanded database of chaetognaths COI barcodes is needed to improve the accuracy of species identification and phylogeny of this complex group of organisms. Further, it is well known that an evolutionary tree (gene tree) constructed from DNA sequences for a genetic locus does not necessarily approve with the tree that represents the real evolutionary pathway of the species involved (species tree). Therefore, one has to use DNA sequences from various loci that have evolved independently of each other to predict the actual evolutionary relationship of organisms ( Pamilo et al., 1988). Although we used only a single set of gene locus (COI) in our analyses, we were able to compare our results with previously proposed major hypotheses using various molecular loci and thereby provided new insights into the evolutionary relationships of chaetognaths.